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A medium-throughput method to phenotype fish for individual feed efficiency ArchiMer
Besson, Mathieu; Allal, Francois; Chatain, Beatrice; Vergnet, Alain; Clota, Frederic; Ferrari, Sebastien; Vandeputte, Marc.
Tipo: Text
Ano: 2017 URL: http://archimer.ifremer.fr/doc/00446/55752/57413.pdf
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Combining Individual Phenotypes of Feed Intake With Genomic Data to Improve Feed Efficiency in Sea Bass ArchiMer
Besson, Mathieu; Allal, Francois; Chatain, Beatrice; Vergnet, Alain; Clota, Frederic; Vandeputte, Marc.
Measuring individual feed intake of fish in farms is complex and precludes selective breeding for feed conversion ratio (FCR). Here, we estimated the individual FCR of 588 sea bass using individual rearing under restricted feeding. These fish were also phenotyped for their weight loss at fasting and muscle fat content that were possibly linked to FCR. The 588 fish were derived from a full factorial mating between parental lines divergently selected for high (F+) or low (F–) weight loss at fasting. The pedigree was known back to the great grand-parents. A subset of 400 offspring and their ancestors were genotyped for 1,110 SNPs which allowed to calculate the genomic heritability of traits. Individual FCR and growth rate in aquarium were both heritable...
Tipo: Text Palavras-chave: Aquaculture; Feed conversion ratio; Fine phenotyping; Genomic selection; Individual feed intake; Restricted feeding; Selective breeding.
Ano: 2019 URL: https://archimer.ifremer.fr/doc/00486/59799/62927.pdf
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Estimation of genetic parameters of feed conversion ratio based on individual phenotypes and genomic data in sea bass ArchiMer
Besson, Mathieu; Allal, Francois; Chatain, Beatrice; Vergnet, Alain; Clota, Frederic; Ferrari, Sebastien; Vandeputte, Marc.
We estimated genetic parameters of feed conversion ratio (FCR) and daily growth coefficient (DGC) using individual phenotypes measured in aquariums under a restricted feeding regime and genomic information on 2,722 SNP markers. The results showed a moderate heritability of both traits (0.26 for FCR and 0.41 for DGC) as well as close to unity negative genetic correlation between them. Thus, FCR of fish in aquariums could be improved by selecting fish for higher DGC. Nevertheless, these results must be taken with caution until we know whether individual FCR measured in aquariums also reflects the FCR of fish reared in groups.    
Tipo: Text Palavras-chave: Feed efficiency; Fish; Genomics.
Ano: 2018 URL: http://archimer.ifremer.fr/doc/00446/55756/57416.pdf
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Evaluation of a European sea bass (Dicentrarchus labrax L.) post-larval tagging method with ultra-small RFID tags ArchiMer
Faggion, Sara; Sanchez, Pierre; Vandeputte, Marc; Clota, Frederic; Vergnet, Alain; Blanc, Marie-odile; Allal, Francois.
Individual tagging is key to a better understanding of early life stages in fish. Very small RFID transponder microchips (500 × 500 × 100 μm, 82 μg) are now available. The aim of this study was to develop a protocol to tag European sea bass (Dicentrarchus labrax L.) larvae from 61 days post-hatching (dph; standard length ~10 mm) to 96 dph (standard length ~28 mm) through intra-coelomic implantation of microchips. The suitability of such a tagging procedure was evaluated, with the purpose of determining the minimal fish age and body size for microchip tagging without adverse effects on survival and growth performance. We produced an experimental population composed by 50:50 normally pigmented larvae and albino larvae through artificial fertilization. Five...
Tipo: Text Palavras-chave: Larvae; RFID transponder; Individual identification; Tagging effects; Dicentrarchus labrax L.
Ano: 2020 URL: https://archimer.ifremer.fr/doc/00601/71331/73084.pdf
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Low temperature has opposite effects on sex determination in a marine fish at the larval/postlarval and juvenile stages ArchiMer
Vandeputte, Marc; Clota, Frederic; Sadoul, Bastien; Blanc, Marie-odile; Blondeau-bidet, Eva; Bégout, Marie-laure; Cousin, Xavier; Geffroy, Benjamin.
Temperature‐dependent sex determination (TSD) can be observed in multiple reptile and fish species. It is adaptive when varying environmental conditions advantage either males or females. A good knowledge of the thermosensitive period is key to understand how environmental changes may lead to changes in population sex ratio. Here, by manipulating temperature during development, we confirm that cold temperature (16°C) increases the proportion of fish that develop as females in European sea bass (Dicentrarchus labrax) until 56 days posthatching, but show that it has an opposite effect at later stages, with the proportion of males reaching ~90% after 230 days at 16°C. This is the first observation of opposite effects of temperature at different time periods...
Tipo: Text Palavras-chave: Dicentrarchus labrax; Fish; Sex ratio; Temperature-dependent sex determination; Thermosensitive period; TSD.
Ano: 2020 URL: https://archimer.ifremer.fr/doc/00658/76965/78184.pdf
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Population, Temperature and Feeding Rate Effects on Individual Feed Efficiency in European Sea Bass (Dicentrarchus labrax) ArchiMer
Rodde, Charles; Vandeputte, Marc; Allal, Francois; Besson, Mathieu; Clota, Frederic; Vergnet, Alain; Benzie, John A. H.; De Verdal, Hugues.
Using breeding programs to improve feed efficiency, the ratio between fish body weight gain (BWG) and feed intake (FI), could increase aquaculture sustainability through reduced feed costs and environmental impact. To this end, individual phenotypic information is required. Individual FI can be measured by isolating each fish. Under these conditions, restricting the feeding rate has proved relevant to improve feed efficiency indirectly by selecting faster-growing animals. Moreover, a restricted feeding rate reduces the work load of collecting uneaten pellets after each meal. The approach assumes the most efficient fish at high and low feeding rates are the same, but this assumption remains untested. In European sea bass (Dicentrarchus labrax), feed...
Tipo: Text Palavras-chave: Aquaculture; Individual rearing; Feed efficiency; Feeding rate; Fasting tolerance; Sea bass.
Ano: 2020 URL: https://archimer.ifremer.fr/doc/00654/76614/77767.pdf
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Reproductive behaviour of two tilapia species ( Oreochromis niloticus , Linné, 1758; Sarotherodon melanotheron, Rüppel, 1852) in freshwater intra and interspecific pairing context ArchiMer
Akian, Dieudonne; Yao, Kouakou; Clota, Frederic; Lozano, Paul; Baroiller, Jean Francois; Chatain, Beatrice; Begout, Marie-laure.
Nile tilapia Oreochromis niloticus (NT) and Black-chinned tilapia Sarotherodon melanotheron (BCT) are respectively characterized by fast growth and water salinity tolerance which attract the farmers who could take advantage of both species characteristics by producing hybrids reared in brackish or marine waters. Little information is however available about social interactions between the two species which are distinct by their mode of parental care (oral incubation). The objective of this study was to determine the behaviour of the two species, NT and BCT placed in freshwater intraspecific and interspecific pairing contexts. Females of both species (n = 20 per species) were first isolated for 90 days in a 60 L aquarium to determine the average duration...
Tipo: Text Palavras-chave: Aggression; Hybridization; Reproduction; Oreochromis niloticus; Sarotherodon melanotheron; Freshwater.
Ano: 2017 URL: https://archimer.ifremer.fr/doc/00376/48673/49008.pdf
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Sex dimorphism in European sea bass (Dicentrarchus labrax L.): New insights into sex-related growth patterns during very early life stages ArchiMer
Faggion, Sara; Vandeputte, Marc; Vergnet, Alain; Clota, Frederic; Blanc, Marie-odile; Sanchez, Pierre; Ruelle, Francois; Allal, Francois; Wang, Hanping.
The European sea bass (Dicentrarchus labrax) exhibits female-biased sexual size dimorphism (SSD) early in development. New tagging techniques provide the opportunity to monitor individual sex-related growth during the post-larval and juvenile stages. We produced an experimental population through artificial fertilization and followed a rearing-temperature protocol (~16°C from hatching to 112 days post-hatching, dph; ~20°C from 117 to 358 dph) targeting a roughly balanced sex ratio. The fish were tagged with microchips between 61 and 96 dph in five tagging trials of 50 fish each; individual standard length (SL) was recorded through repeated biometric measurements performed between 83 to 110 dph via image analyses. Body weight (BW) was modelled using the...
Tipo: Text
Ano: 2021 URL: https://archimer.ifremer.fr/doc/00691/80288/83391.pdf
Registros recuperados: 8
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